Thursday, May 9, 2013

The Whole Genome of HeLA cell line - The spark to the ethical challenge revolving around personal genomics



HeLa cells have been vital to making groundbreaking research in science for the past six decades. Many Scientists made million passages from them and shipped them from one place to another but did not put too much thought into where they originally established. Rebecca Skloot gave the cells a life and a history through her book “The immortal Life of Henrietta lacks”. The book dealt not just with the origin of the cells but interwove it with scientific discovery, faith healing and racial issues. This book brought to light many ethical issues that were neglected decades ago. Skloot talks about how the Lackses were kept in the dark about the cells, how important and beneficial they were in moving science forward. This book published a few years ago has gained some more importance this year after the HeLa genome was sequenced.

A little bit of Background…

Early this year, in mid March Lars Steinmetz and his group published the sequence of HeLa genome in G3: Genes, Genomes and Genetics online. The study was comparing the genome of HeLa cells to that of normal tissue. This publication sparked a storm of ethical controversies that forced them withdraw the publication. This is also the first time a genome has been withdrawn from public access. The family stated that the genome sequence is private family information and it should not be published without consent. EMBL describes the genome to be chaotic, complex and fractured representative more of a cancer genome than of the family itself. There seems to be more fire on the grill since consent was not received before establishing the cell line itself.

The ethical conundrum

The argument that Skloot points out in her NYT essay is that since the genome was published long after Henrietta’s time, consent should have been received from her family. While we all agree that patient’s consent is top priority while using samples or data for extending continuing research, having the family consent for them is a whole different ball game. It spurs questions like “Do my unborn children have the right to ban me from making my genome sequence open access?” It is an ethical conundrum indeed. It is easy to argue that one’s genome sequence is one’s own private information and hence the individual’s decision to make it as available as possible but it is difficult to ignore the information the data would provide once a SNP calling or comparative mapping is performed.


The awareness people from a non-scientific background have on human genome sequencing is limited. Having information available online makes it sound like facebook only with 100x more coverage. This is not true. It is important to remember that most of the analysis that comes out of human genome sequencing is a “prediction” with a percentage or a probability number associated with it until it manifests into a phenotype. But it is also important to remember the good that has come out from making sequences publicly available. Publicizing genomes may not be the first aspect that we think about when it comes to our own sequence, but on the flip side when there is an issue for example a rare genetic disease, it opens up more resources and the chance of a remedy when data is available to other researchers.

The can of worms that have been opened because of the HeLa Genome will hopefully help establishing policies regarding sequencing and publishing of human sequences. As we move a step further into personalized medicine, it is important to have this in place but in doing so not forget the direction we want to personal genomics to take or how beneficial it can turn out to be.

A more edited version can be found here


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